I am having issues with doing a fresh deployment of OpenSpecimen 5.10. I followed the instruction here https://openspecimen.atlassian.net/wiki/spaces/CAT/pages/289964033/Fresh+deployment+steps+5.0.2+onwards
After tomcat finished starting, I would see 404 error when I go to localhost:8080/openspecimen
Tomcat log has the following error. What am I doing wrong?
12-Sep-2018 15:20:36.506 INFO [main] org.apache.catalina.core.ApplicationContext.log No Spring WebApplicationInitializer types detected on classpath
12-Sep-2018 15:20:36.669 INFO [main] org.apache.catalina.core.ApplicationContext.log Initializing Spring root WebApplicationContext
12-Sep-2018 15:20:51.555 INFO [main] org.apache.catalina.core.ApplicationContext.log Initializing Spring FrameworkServlet ‘pluginUiResources’
12-Sep-2018 15:20:51.795 INFO [main] org.apache.catalina.core.ApplicationContext.log Initializing Spring FrameworkServlet ‘restApi’
12-Sep-2018 15:20:52.307 SEVERE [main] org.apache.catalina.core.ApplicationContext.log StandardWrapper.Throwable
org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerMapping#0’: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: com/krishagni/catissueplus/core/biospecimen/events/LabelPrintJobSummary
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1514)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:521)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:458)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:191)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:636)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:934)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:651)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:602)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:665)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:521)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:462)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:136)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1124)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1079)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:971)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4813)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5125)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:742)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:718)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:703)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:986)
at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1858)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:112)
at org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:772)
at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:426)
at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1585)
at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:308)
at org.apache.catalina.util.LifecycleBase.fireLifecycleEvent(LifecycleBase.java:123)
at org.apache.catalina.util.LifecycleBase.setStateInternal(LifecycleBase.java:424)
at org.apache.catalina.util.LifecycleBase.setState(LifecycleBase.java:367)
at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:966)
at org.apache.catalina.core.StandardHost.startInternal(StandardHost.java:839)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1427)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1417)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:134)
at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:943)
at org.apache.catalina.core.StandardEngine.startInternal(StandardEngine.java:258)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.StandardService.startInternal(StandardService.java:422)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:770)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.startup.Catalina.start(Catalina.java:682)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:350)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:492)
Caused by: java.lang.NoClassDefFoundError: com/krishagni/catissueplus/core/biospecimen/events/LabelPrintJobSummary
at java.lang.Class.getDeclaredMethods0(Native Method)
at java.lang.Class.privateGetDeclaredMethods(Class.java:2701)
at java.lang.Class.getDeclaredMethods(Class.java:1975)
at org.springframework.util.ReflectionUtils.getDeclaredMethods(ReflectionUtils.java:568)
at org.springframework.util.ReflectionUtils.doWithMethods(ReflectionUtils.java:489)
at org.springframework.web.method.HandlerMethodSelector.selectMethods(HandlerMethodSelector.java:57)
at org.springframework.web.servlet.handler.AbstractHandlerMethodMapping.detectHandlerMethods(AbstractHandlerMethodMapping.java:133)
at org.springframework.web.servlet.handler.AbstractHandlerMethodMapping.initHandlerMethods(AbstractHandlerMethodMapping.java:108)
at org.springframework.web.servlet.handler.AbstractHandlerMethodMapping.afterPropertiesSet(AbstractHandlerMethodMapping.java:88)
at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerMapping.afterPropertiesSet(RequestMappingHandlerMapping.java:126)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1573)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1511)
… 60 more
Caused by: java.lang.ClassNotFoundException: com.krishagni.catissueplus.core.biospecimen.events.LabelPrintJobSummary
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1292)
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1121)
… 72 more
12-Sep-2018 15:20:52.307 SEVERE [main] org.apache.catalina.core.StandardContext.loadOnStartup Servlet [restApi] in web application [/openspecimen] threw load() exception
java.lang.ClassNotFoundException: com.krishagni.catissueplus.core.biospecimen.events.LabelPrintJobSummary
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1292)
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1121)
at java.lang.Class.getDeclaredMethods0(Native Method)
at java.lang.Class.privateGetDeclaredMethods(Class.java:2701)
at java.lang.Class.getDeclaredMethods(Class.java:1975)
at org.springframework.util.ReflectionUtils.getDeclaredMethods(ReflectionUtils.java:568)
at org.springframework.util.ReflectionUtils.doWithMethods(ReflectionUtils.java:489)
at org.springframework.web.method.HandlerMethodSelector.selectMethods(HandlerMethodSelector.java:57)
at org.springframework.web.servlet.handler.AbstractHandlerMethodMapping.detectHandlerMethods(AbstractHandlerMethodMapping.java:133)
at org.springframework.web.servlet.handler.AbstractHandlerMethodMapping.initHandlerMethods(AbstractHandlerMethodMapping.java:108)
at org.springframework.web.servlet.handler.AbstractHandlerMethodMapping.afterPropertiesSet(AbstractHandlerMethodMapping.java:88)
at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerMapping.afterPropertiesSet(RequestMappingHandlerMapping.java:126)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1573)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1511)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:521)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:458)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:293)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:290)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:191)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:636)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:934)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:479)
at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:651)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:602)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:665)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:521)
at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:462)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:136)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1124)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1079)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:971)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4813)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5125)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:742)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:718)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:703)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:986)
at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1858)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:112)
at org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:772)
at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:426)
at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1585)
at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:308)
at org.apache.catalina.util.LifecycleBase.fireLifecycleEvent(LifecycleBase.java:123)
at org.apache.catalina.util.LifecycleBase.setStateInternal(LifecycleBase.java:424)
at org.apache.catalina.util.LifecycleBase.setState(LifecycleBase.java:367)
at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:966)
at org.apache.catalina.core.StandardHost.startInternal(StandardHost.java:839)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1427)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1417)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:134)
at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:943)
at org.apache.catalina.core.StandardEngine.startInternal(StandardEngine.java:258)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.StandardService.startInternal(StandardService.java:422)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:770)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.startup.Catalina.start(Catalina.java:682)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:350)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:492)