22-Jun-2022 21:04:41.650 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version name:   Apache Tomcat/9.0.31 (Ubuntu)
22-Jun-2022 21:04:41.651 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server built:          Mar 16 2022 18:51:24 UTC
22-Jun-2022 21:04:41.651 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version number: 9.0.31.0
22-Jun-2022 21:04:41.651 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Name:               Linux
22-Jun-2022 21:04:41.651 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Version:            5.4.0-113-generic
22-Jun-2022 21:04:41.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Architecture:          amd64
22-Jun-2022 21:04:41.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Java Home:             /usr/lib/jvm/java-8-openjdk-amd64/jre
22-Jun-2022 21:04:41.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Version:           1.8.0_312-8u312-b07-0ubuntu1~20.04-b07
22-Jun-2022 21:04:41.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Vendor:            Private Build
22-Jun-2022 21:04:41.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_BASE:         /var/lib/tomcat9
22-Jun-2022 21:04:41.652 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_HOME:         /usr/share/tomcat9
22-Jun-2022 21:04:41.658 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.config.file=/var/lib/tomcat9/conf/logging.properties
22-Jun-2022 21:04:41.658 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
22-Jun-2022 21:04:41.659 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.awt.headless=true
22-Jun-2022 21:04:41.659 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djdk.tls.ephemeralDHKeySize=2048
22-Jun-2022 21:04:41.659 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.protocol.handler.pkgs=org.apache.catalina.webresources
22-Jun-2022 21:04:41.670 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dorg.apache.catalina.security.SecurityListener.UMASK=0027
22-Jun-2022 21:04:41.674 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dignore.endorsed.dirs=
22-Jun-2022 21:04:41.674 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.base=/var/lib/tomcat9
22-Jun-2022 21:04:41.676 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.home=/usr/share/tomcat9
22-Jun-2022 21:04:41.676 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.io.tmpdir=/tmp
22-Jun-2022 21:04:41.676 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent Loaded APR based Apache Tomcat Native library [1.2.23] using APR version [1.6.5].
22-Jun-2022 21:04:41.677 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent APR capabilities: IPv6 [true], sendfile [true], accept filters [false], random [true].
22-Jun-2022 21:04:41.677 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent APR/OpenSSL configuration: useAprConnector [false], useOpenSSL [true]
22-Jun-2022 21:04:41.685 INFO [main] org.apache.catalina.core.AprLifecycleListener.initializeSSL OpenSSL successfully initialized [OpenSSL 1.1.1f  31 Mar 2020]
22-Jun-2022 21:04:42.002 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8080"]
22-Jun-2022 21:04:42.052 INFO [main] org.apache.catalina.startup.Catalina.load Server initialization in [628] milliseconds
22-Jun-2022 21:04:42.095 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service [Catalina]
22-Jun-2022 21:04:42.095 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet engine: [Apache Tomcat/9.0.31 (Ubuntu)]
22-Jun-2022 21:04:42.108 INFO [main] org.apache.catalina.startup.HostConfig.deployDescriptor Deploying deployment descriptor [/etc/tomcat9/Catalina/localhost/host-manager.xml]
22-Jun-2022 21:04:42.145 WARNING [main] org.apache.catalina.startup.HostConfig.deployDescriptor The path attribute with value [/host-manager] in deployment descriptor [/etc/tomcat9/Catalina/localhost/host-manager.xml] has been ignored
22-Jun-2022 21:04:43.228 WARNING [main] org.apache.tomcat.dbcp.dbcp2.BasicDataSourceFactory.getObjectInstance Name = openspecimen Property maxActive is not used in DBCP2, use maxTotal instead. maxTotal default value is 8. You have set value of "100" for "maxActive" property, which is being ignored.
22-Jun-2022 21:04:43.229 WARNING [main] org.apache.tomcat.dbcp.dbcp2.BasicDataSourceFactory.getObjectInstance Name = openspecimen Property maxWait is not used in DBCP2 , use maxWaitMillis instead. maxWaitMillis default value is -1. You have set value of "10000" for "maxWait" property, which is being ignored.
22-Jun-2022 21:04:43.283 INFO [main] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
22-Jun-2022 21:04:43.313 INFO [main] org.apache.catalina.startup.HostConfig.deployDescriptor Deployment of deployment descriptor [/etc/tomcat9/Catalina/localhost/host-manager.xml] has finished in [1,205] ms
22-Jun-2022 21:04:43.313 INFO [main] org.apache.catalina.startup.HostConfig.deployDescriptor Deploying deployment descriptor [/etc/tomcat9/Catalina/localhost/manager.xml]
22-Jun-2022 21:04:43.315 WARNING [main] org.apache.catalina.startup.HostConfig.deployDescriptor The path attribute with value [/manager] in deployment descriptor [/etc/tomcat9/Catalina/localhost/manager.xml] has been ignored
22-Jun-2022 21:04:44.094 WARNING [main] org.apache.tomcat.dbcp.dbcp2.BasicDataSourceFactory.getObjectInstance Name = openspecimen Property maxActive is not used in DBCP2, use maxTotal instead. maxTotal default value is 8. You have set value of "100" for "maxActive" property, which is being ignored.
22-Jun-2022 21:04:44.095 WARNING [main] org.apache.tomcat.dbcp.dbcp2.BasicDataSourceFactory.getObjectInstance Name = openspecimen Property maxWait is not used in DBCP2 , use maxWaitMillis instead. maxWaitMillis default value is -1. You have set value of "10000" for "maxWait" property, which is being ignored.
22-Jun-2022 21:04:44.109 INFO [main] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
22-Jun-2022 21:04:44.127 INFO [main] org.apache.catalina.startup.HostConfig.deployDescriptor Deployment of deployment descriptor [/etc/tomcat9/Catalina/localhost/manager.xml] has finished in [814] ms
22-Jun-2022 21:04:44.128 INFO [main] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory [/var/lib/tomcat9/webapps/ROOT]
22-Jun-2022 21:04:44.787 WARNING [main] org.apache.tomcat.dbcp.dbcp2.BasicDataSourceFactory.getObjectInstance Name = openspecimen Property maxActive is not used in DBCP2, use maxTotal instead. maxTotal default value is 8. You have set value of "100" for "maxActive" property, which is being ignored.
22-Jun-2022 21:04:44.787 WARNING [main] org.apache.tomcat.dbcp.dbcp2.BasicDataSourceFactory.getObjectInstance Name = openspecimen Property maxWait is not used in DBCP2 , use maxWaitMillis instead. maxWaitMillis default value is -1. You have set value of "10000" for "maxWait" property, which is being ignored.
22-Jun-2022 21:04:44.801 INFO [main] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
22-Jun-2022 21:04:44.808 INFO [main] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory [/var/lib/tomcat9/webapps/ROOT] has finished in [679] ms
22-Jun-2022 21:04:44.814 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["http-nio-8080"]
22-Jun-2022 21:04:44.821 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in [2,768] milliseconds
22-Jun-2022 21:04:54.818 INFO [Catalina-utility-1] org.apache.catalina.startup.HostConfig.deployWAR Deploying web application archive [/var/lib/tomcat9/webapps/openspecimen.war]
22-Jun-2022 21:04:59.757 WARNING [Catalina-utility-1] org.apache.tomcat.dbcp.dbcp2.BasicDataSourceFactory.getObjectInstance Name = openspecimen Property maxActive is not used in DBCP2, use maxTotal instead. maxTotal default value is 8. You have set value of "100" for "maxActive" property, which is being ignored.
22-Jun-2022 21:04:59.758 WARNING [Catalina-utility-1] org.apache.tomcat.dbcp.dbcp2.BasicDataSourceFactory.getObjectInstance Name = openspecimen Property maxWait is not used in DBCP2 , use maxWaitMillis instead. maxWaitMillis default value is -1. You have set value of "10000" for "maxWait" property, which is being ignored.
22-Jun-2022 21:04:59.841 INFO [Catalina-utility-1] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
22-Jun-2022 21:05:03.379 INFO [Catalina-utility-1] liquibase.lockservice.null Successfully acquired change log lock
22-Jun-2022 21:05:03.954 INFO [Catalina-utility-1] liquibase.changelog.null Reading from openspecimen.DATABASECHANGELOG
22-Jun-2022 21:05:04.285 INFO [Catalina-utility-1] liquibase.lockservice.null Successfully released change log lock
22-Jun-2022 21:05:04.368 INFO [Catalina-utility-1] liquibase.lockservice.null Successfully acquired change log lock
22-Jun-2022 21:05:05.553 INFO [Catalina-utility-1] liquibase.changelog.null Reading from openspecimen.DATABASECHANGELOG
22-Jun-2022 21:05:06.432 INFO [Catalina-utility-1] liquibase.changelog.null ChangeSet db/db-os-pre-conditions.xml::Pre condition to check the storage engine::slakhani ran successfully in 2ms
22-Jun-2022 21:05:06.457 INFO [Catalina-utility-1] liquibase.changelog.null ChangeSet db/db-os-pre-conditions.xml::Pre condition to check the case sensitivity::nmarwaha ran successfully in 2ms
22-Jun-2022 21:05:06.518 INFO [Catalina-utility-1] liquibase.changelog.null Change set db/2.0/schema.xml::Drop foreign key from CRG column in CATISSUE_USER::nmarwaha failed, but failOnError was false.  Error: Can't DROP 'FKB025CFC7FFA96920'; check that column/key exists [Failed SQL: (1091) ALTER TABLE openspecimen.CATISSUE_USER DROP FOREIGN KEY FKB025CFC7FFA96920]
22-Jun-2022 21:05:06.534 INFO [Catalina-utility-1] liquibase.changelog.null Change set db/2.0/schema.xml::Drop WUSTLKEY column from CATISSUE_USER::nmarwaha failed, but failOnError was false.  Error: Can't DROP 'WUSTLKEY'; check that column/key exists [Failed SQL: (1091) ALTER TABLE openspecimen.CATISSUE_USER DROP COLUMN WUSTLKEY]
22-Jun-2022 21:05:06.561 INFO [Catalina-utility-1] liquibase.changelog.null Change set db/2.0/schema.xml::Drop UK on csm_user_id from catissue user table::vlonushte failed, but failOnError was false.  Error: Can't DROP 'CSM_USER_ID_UNIQUE_KEY'; check that column/key exists [Failed SQL: (1091) ALTER TABLE openspecimen.CATISSUE_USER DROP KEY CSM_USER_ID_UNIQUE_KEY]
22-Jun-2022 21:05:06.638 INFO [Catalina-utility-1] liquibase.lockservice.null Successfully released change log lock
22-Jun-2022 21:05:14.360 INFO [Catalina-utility-1] liquibase.lockservice.null Successfully acquired change log lock
22-Jun-2022 21:05:14.435 INFO [Catalina-utility-1] liquibase.changelog.null Reading from openspecimen.DATABASECHANGELOG
22-Jun-2022 21:05:14.669 INFO [Catalina-utility-1] liquibase.lockservice.null Successfully released change log lock
22-Jun-2022 21:05:15.287 INFO [Catalina-utility-1] liquibase.lockservice.null Successfully acquired change log lock
22-Jun-2022 21:05:15.342 INFO [Catalina-utility-1] liquibase.changelog.null Reading from openspecimen.DATABASECHANGELOG
22-Jun-2022 21:05:15.583 INFO [Catalina-utility-1] liquibase.lockservice.null Successfully released change log lock
22-Jun-2022 21:05:18.208 INFO [Catalina-utility-1] org.apache.catalina.startup.HostConfig.deployWAR Deployment of web application archive [/var/lib/tomcat9/webapps/openspecimen.war] has finished in [23,389] ms